20.4.1 Chromosome Analysis and Extraction

Chapter Contents (Back)
Chromosomes. Many of the earlier papers.

Paton, K.,
Conic sections in chromosome analysis,
PR(2), No. 1, January 1970, pp. 39-40.
WWW Version. 0309 BibRef

Lee, E.T.,
The shape-oriented dissimilarity of polygons and its application to the classification of chromosome images,
PR(6), No. 1, June 1974, pp. 47-60.
WWW Version. 0309 BibRef

Vanderheydt, L., Oosterlinck, A., van Daele, J., van den Berghe, H.,
Design of a graph-representation and a fuzzy-classifier for human chromosomes,
PR(12), No. 3, 1980, pp. 201-210.
WWW Version. 0309 BibRef

Vanderheydt, L., Dom, F., Oosterlinck, A., van den Berghe, H.,
Two-dimensional shape decomposition using fuzzy subset theory applied to automated chromosome analysis,
PR(13), No. 2, 1981, pp. 147-157.
WWW Version. 0309 BibRef

Nickolls, P., Piper, J., Rutovitz, D., Chisholm, A., Johnstone, I., Robertson, M.,
Pre-processing of images in an automated chromosome analysis system,
PR(14), No. 1-6, 1981, pp. 219-229.
WWW Version. 0309 BibRef

Lundsteen, C.[Claes], Gerdes, T.[Tommy], Philip, K.[Kim],
A model for selection of attributes for automatic pattern recognition. Stepwise data compression monitored by visual classification,
PR(15), No. 3, 1982, pp. 243-251.
WWW Version. 0309Based on a pattern recognition study of human chromosomes a model is proposed for selection of attributes for automatic pattern recognition. BibRef

Harms, H., Gunzer, U., Aus, H.M.,
Combined Local Color and Texture Analysis of Stained Cells,
CVGIP(33), No. 3, March 1986, pp. 364-376. BibRef 8603

Gallus, G., Neurath, P.W.,
Improved Computer Chromosome Analysis Incorporating Preprocessing and Boundary Analysis,
Physics in Med. and Bio.(15), No. 3, 1970, p0p. 435-445. BibRef 7000

Klinger, A., Kochman, A., Alexandridis, N.A.,
Computer Analysis of Chromosome Patterns,
TC(20), No. 9, September 1971, ppp. 1014. BibRef 7109

Onoe, M., Takagi, M., Yukimatsu, K.,
Chromosome Analysis by Minicomputer,
CGIP(2), 1973, pp. 402-416. BibRef 7300

Granlund, G.H.,
Statistical Analysis of Chromosome Characteristics,
PR(6), No. 2, October 1974, pp. 115-126.
WWW Version. BibRef 7410

Tso, M.K.S., Graham, J.,
The Transformation Algorithm as an Aid to Chromosome Classification,
PRL(1), 1983, pp. 489-496. BibRef 8300

Piper, J., Granum, E., Rutovitz, D., Ruttledge, H.,
Automation of Chromosome Analysis,
SP(2), 1980, pp. 203-221. BibRef 8000

Piper, J.,
Classification of Chromosomes Contrained by Expected Class Size,
PRL(4), 1986, pp. 391-395. BibRef 8600

Piper, J., Rutovitz, D.,
A Parallel Processor Implementation of a Chromosome Analysis System,
PRL(4), 1986, pp. 397-404. BibRef 8600

Ji, L.[Liang],
Intelligent splitting in the chromosome domain,
PR(22), No. 5, 1989, pp. 519-532.
WWW Version. 0309 BibRef

He, L.[Liang], Chai, Z.M.[Zhen-Ming],
A new method of automatic SCE detection,
PR(23), No. 1-2, 1990, pp. 95-97.
WWW Version. 0401sister chromatid exchange. BibRef

Turner, M., Austin, J., Allinson, N.M., Thompson, P.,
Chromosome location and feature extraction using neural networks,
IVC(11), No. 4, May 1993, pp. 235-239.
WWW Version. 0401 BibRef

Lerner, B., Guterman, H., Dinstein, I., Romem, Y.,
Medial Axis Transform-Based Features and a Neural-Network for Human-Chromosome Classification,
PR(28), No. 11, November 1995, pp. 1673-1683.
WWW Version. Medial Axis Transform. BibRef 9511

Dougherty, E.R., Chen, Y.D., Waks, A.,
Bayesian Morphological Peak Estimation and Its Application to Chromosome Counting Via Fluorescence in-Situ Hybridization,
PR(29), No. 6, June 1996, pp. 987-996.
WWW Version. 9606 BibRef

Ritter, G.[Gunter], Gallegos, M.T.[María Teresa], Gaggermeier, K.[Karl],
Automatic context-sensitive karyotyping of human chromosomes based on elliptically symmetric statistical distributions,
PR(28), No. 6, June 1995, pp. 823-831.
WWW Version. 0401 BibRef

Ritter, G., Gallegos, M.T.,
Outliers in Statistical Pattern Recognition and an Application to Automatic Chromosome Classification,
PRL(18), No. 6, June 1997, pp. 525-539. 9710 BibRef

Agam, G., Dinstein, I.,
Geometric Separation of Partially Overlapping Nonrigid Objects Applied to Automatic Chromosome Classification,
PAMI(19), No. 11, November 1997, pp. 1212-1222.
IEEE Abstract. IEEE Top Reference.
WWW Version. 9712Merge the separation problem and recognition problem. BibRef

Stanley, R.J.[Ronald J.], Keller, J.M.[James M.], Gader, P.D.[Paul D.], Caldwell, C.W.[Charles W.],
Homologue Matching Applications: Recognition of Overlapped Chromosomes,
PAA(1), No. 4 1998, pp. 206-217. BibRef 9800

Stanley, R.J., Keller, J.M., Gader, P.D., Caldwell, C.W.,
Data-Driven Homolog Matching for Chromosome Identification,
MedImg(17), No. 3, June 1998, pp. 451-462.
IEEE Top Reference. 9809 BibRef

Charters, G.C.[Graham C.], Graham, J.[Jim],
Trainable grey-level models for disentangling overlapping chromosomes,
PR(32), No. 8, August 1999, pp. 1335-1349.
WWW Version. BibRef 9908

Ritter, G.[Gunter], Gaggermeier, K.[Karl],
Automatic classification of chromosomes by means of quadratically asymmetric statistical distributions,
PR(32), No. 6, June 1999, pp. 997-1008.
WWW Version. BibRef 9906

Ritter, G.[Gunter], Schreib, G.[Gernot],
Using dominant points and variants for profile extraction from chromosomes,
PR(34), No. 4, April 2001, pp. 923-938.
WWW Version. 0101 BibRef
Earlier:
Profile and Feature Extraction from Chromosomes,
ICPR00(Vol II: 287-290).
WWW Version.
HTML Version. 0009 BibRef

Wang, Y.P.[Yu-Ping], Wu, Q.[Qiang], Castleman, K.R., Xiong, Z.X.[Zi-Xiang],
Chromosome image enhancement using multiscale differential operators,
MedImg(22), No. 5, May 2003, pp. 685-693.
IEEE Abstract. IEEE Top Reference. 0307 BibRef

Choi, H., Castleman, K.R., Bovik, A.C.,
Segmentation and Fuzzy-Logic Classification of M-FISH Chromosome Images,
ICIP06(69-72). 0610
WWW Version. BibRef

Wang, Y.P.,
Image Representations Using Multiscale Differential Operators,
IP(8), No. 12, December 1999, pp. 1757-1771.
WWW Version. 9912 BibRef

Urdiales García, C.[Cristina], Bandera Rubio, A.[Antonio], Arrebola Pérez, F.[Fabián], Sandoval Hernández, F.[Francisco],
A curvature-based multiresolution automatic karyotyping system,
MVA(14), No. 3, July 2003, pp. 145-156.
WWW Version. 0308 BibRef

Cai, N.[Nian], Hu, K.[Kuanghu], Xiong, H.T.[Hai-Tao], Li, S.Y.[Shu-Yu], Su, W.[Wanfang], Zhu, F.S.[Feng-Sui],
Image segmentation of G bands of Triticum monococcum chromosomes based on the model-based neural network,
PRL(25), No. 3, February 2004, pp. 319-329.
WWW Version. 0401 BibRef

Sampat, M.P., Bovik, A.C., Aggarwal, J.K., Castleman, K.R.,
Supervised parametric and non-parametric classification of chromosome images,
PR(38), No. 8, August 2005, pp. 1209-1223.
WWW Version. 0505 BibRef

Wu, Q., Liu, Z., Chen, T., Xiong, Z., Castleman, K.R.,
Subspace-Based Prototyping and Classification of Chromosome Images,
IP(14), No. 9, September 2005, pp. 1277-1287.
WWW Version. 0508 BibRef

Sage, D., Neumann, F.R., Hediger, F., Gasser, S.M., Unser, M.,
Automatic Tracking of Individual Fluorescence Particles: Application to the Study of Chromosome Dynamics,
IP(14), No. 9, September 2005, pp. 1372-1383.
WWW Version. 0508 BibRef

Moradi, M.[Mehdi], Setarehdan, S.K.[S. Kamaledin],
New features for automatic classification of human chromosomes: A feasibility study,
PRL(27), No. 1, 1 January 2006, pp. 19-28.
WWW Version. 0512 BibRef

Schwartzkopf, W.C., Bovik, A.C., Evans, B.L.,
Maximum-likelihood techniques for joint segmentation-classification of multispectral chromosome images,
MedImg(24), No. 12, December 2005, pp. 1593-1610.
WWW Version. 0601 BibRef

Kao, J.H.[Jau-Hong], Chuang, J.H.[Jen-Hui], Wang, T.P.[Tsai-Pei],
Chromosome classification based on the band profile similarity along approximate medial axis,
PR(41), No. 1, January 2008, pp. 77-89.
WWW Version. 0710 BibRef
Earlier:
Automatic Chromosome Classification Using Medial Axis Approximation and Band Profile Similarity,
ACCV06(II:274-283).
WWW Version. 0601Chromosome classification; Medial axis; Sequence similarity; Sequence matching BibRef

Ritter, G.[Gunter], Gao, L.[Le],
Automatic segmentation of metaphase cells based on global context and variant analysis,
PR(41), No. 1, January 2008, pp. 38-55.
WWW Version. 0710Automatic chromosome segmentation; Karyotyping; Shape analysis; Context; Variant analysis; Diagnostic classification BibRef

Bandyopadhyay, S., Maulik, U., Roy, D.,
Gene Identification: Classical and Computational Intelligence Approaches,
SMC-C(38), No. 1, January 2008, pp. 55-68.
WWW Version. 0712 BibRef

Legrand, B.[Benoit], Chang, C.S., Ong, S.H., Neo, S.Y.[Soek-Ying], Palanisamy, N.[Nallasivam],
Chromosome classification using dynamic time warping,
PRL(29), No. 3, 1 February 2008, pp. 215-222.
WWW Version. 0801Chromosome; Karyotype; Feature extraction; Classification; Dynamic time warping BibRef

Karvelis, P.S., Tzallas, A.T., Fotiadis, D.I., Georgiou, I.,
A Multichannel Watershed-Based Segmentation Method for Multispectral Chromosome Classification,
MedImg(27), No. 5, May 2008, pp. 697-708.
WWW Version. 0711 BibRef

Roshtkhari, M.J.[Mehrsan Javan], Setarehdan, S.K.[Seyed Kamaledin],
A novel algorithm for straightening highly curved images of human chromosome,
PRL(29), No. 9, 1 July 2008, pp. 1208-1217.
WWW Version. 0711Curved chromosomes; Chromosome classification; Projection vectors; Chromosome straightening BibRef


Ben, N.[Niu], Yang, Q.[Qiang], Li, J.[Jinyan], Chi-keung, S.[Shiu], Pal, S.K.[Sankar K.],
Discovering Patterns of DNA Methylation: Rule Mining with Rough Sets and Decision Trees, and Comethylation Analysis,
PReMI07(389-397).
WWW Version. 0712 BibRef

Sousa, A.V.[António V.], Mendonça, A.M.[Ana Maria], Campilho, A.[Aurélio], Aguiar, R.[Rui], Miranda, C.S.[C. Sá],
Feature Extraction for Classification of Thin-Layer Chromatography Images,
ICIAR05(974-981).
WWW Version. 0509 BibRef

Sousa, A.V.[António V.], Aguiar, R.[Rui], Mendonça, A.M.[Ana Maria], Campilho, A.[Aurélio],
Automatic Lane and Band Detection in Images of Thin Layer Chromatography,
ICIAR04(II: 158-165).
WWW Version. 0409 BibRef

Shah, S.[Shishir],
Multispectral Integration for Segmentation of Chromosome Images,
CAIP05(506).
WWW Version. 0509 BibRef

Glory, E., Faure, A., Meas-Yedid, V., Cloppet, F., Pinset, C., Stamon, G., Olivo-Marin, J.C.,
A Quantification Tool to Analyse Stained Cell Cultures,
ICIAR04(II: 84-91).
WWW Version. 0409 BibRef

Gajendran, V., Rodriguez, J.J.,
Chromosome counting via digital image analysis,
ICIP04(V: 2929-2932).
WWW Version. 0505 BibRef

Babu, S.[Sabarish], Liao, P.C.[Pao-Chuan], Shin, M.C.[Min C.], Tsap, L.V.[Leonid V.],
Towards Recovery of 3D Chromosome Structure,
Non-Rigid04(1).
HTML Version. 0502 BibRef

Mousavi, P., Fels, S., Ward, R., Lansdorp, P.,
Classification of Homologous Human Chromosomes Using Mutual Information Maximization,
ICIP01(II: 845-848).
IEEE Abstract. IEEE Top Reference. 0108 BibRef

Schwartzkopf, W., Evans, B.L., Bovik, A.C.,
Entropy estimation for segmentation of multi-spectral chromosome images,
Southwest02(234-237).
IEEE Top Reference. 0208 BibRef

Schwartzkopf, W., Evans, B.L., Bovik, A.C.,
Minimum Entropy Segmentation Applied to Multi-spectral Chromosome Images,
ICIP01(II: 865-868).
IEEE Abstract. IEEE Top Reference. 0108 BibRef

Mousavi, P., Ward, R.,
Multi-feature Analysis and Classification of Human Chromosome Images Using Centromere Segmentation Algorithms,
ICIP00(Vol I: 152-155).
IEEE Abstract. IEEE Top Reference. 0008 BibRef

Kyan, M.[Matthew], Guan, L.[Ling], Arnison, M.[Matthew], Cogswell, C.[Carol],
Feature Extraction of Chromosomes from 3D Confocal Microscope images,
ICIP99(II:843-847).
IEEE Abstract. IEEE Top Reference. BibRef 9900

Karsligil, M.E.[M. Elif], Karsligil, M.Y.[M. Yahya],
Fuzzy Similarity Relations for Chromosome Classification and Identification,
CAIP99(142-148).
WWW Version. 9909 BibRef

Turmon, M., and Mukhtar, S.,
Recognizing Chromospheric Objects via Markov Chain Monte Carlo,
ICIP97(III: 320-323).
WWW Version. BibRef 9700

Eskiizmirliler, S., Erkmen, A.M., Basaran, F., Nur Cakar, A.,
A hybrid intelligent diagnostic system based on neural networks and image analysis techniques in the field of automated cytogenetics,
ICIP96(I: 315-318).
WWW Version. 9610 BibRef

Lerner, B., Guterman, H., Dinstein, I., Romem, Y.,
Feature selection and learning curves of a multilayer perceptron chromosome classifier,
ICPR94(B:497-499).
WWW Version. 9410 BibRef

Wiffen, L.N., Kent, J.T.,
The automatic classification of normal and abnormal chromosomes using image analysis,
CAIP93(693-697).
WWW Version. 9309 BibRef

He, L.[Liang], Chai, Z.M.[Zhen-Ming],
Automatic detection of sister chromatid exchange,
ICPR88(II: 652-654).
WWW Version. 8811 BibRef

Chapter on Medical Applications, CAT, MRI, Ultrasound, Heart Models, Brain Models continues in
Extraction and Analysis of Cells .


Last update:Jun 25, 2008 at 13:37:57