20.9.1 Brain, Cortex, MRI Analysis, Models, 3-D

Chapter Contents (Back)
Brain. Cortex. MRI. See also Brain, Cortex, Registration, MRI, Other. See also Functional Magnetic Resonance, fMRI. Segmentation specific papers in: See also Brain, Cortex, MRI Segmentation.

Ge, Y., Fitzpatrick, J.M., Dawant, B.M., Bao, J., Kessler, R.M., Margolin, R.A.,
Accurate localization of cortical convolutions in MR brain images,
MedImg(15), No. 4, August 1996, pp. 418-428.
IEEE Top Reference. 0203 BibRef

Sonka, M., Tadikonda, S.K., Collins, S.M.,
Knowledge-based interpretation of MR brain images,
MedImg(15), No. 4, August 1996, pp. 443-452.
IEEE Top Reference. 0203 BibRef

Freeborough, P.A., Fox, N.C.,
MR Image Texture Analysis Applied to the Diagnosis and Tracking of Alzheimers-Disease,
MedImg(17), No. 3, June 1998, pp. 475-479.
IEEE Top Reference. 9809 BibRef

Freeborough, P.A.[Peter A.],
A Comparison of Fractal Texture Descriptors,
BMVC97(xx-yy).
HTML Version. 0209 BibRef

Gosche, K.M.[Karen M.], Velthuizen, R.P.[Robert P.], Murtagh, F.R.[F. Reed], Arrington, J.A.[John A.], Gross, W.W.[William W.], Mortimer, J.A.[James A.], Clarke, L.P.[Laurence P.],
Automated quantification of brain magnetic resonance image hyperintensities using hybrid clustering and knowledge-based methods,
IJIST(10), No. 3, 1999, pp. 287-293. BibRef 9900

Wang, Y., Adali, T., Lau, C.M., Kung, S.Y.,
Quantitative-Analysis of MR Brain Image Sequences by Adaptive Self-Organizing Finite Mixtures,
VLSIVideo(18), No. 3, April 1998, pp. 219-239. 9806 BibRef

Zengingonul, H.P.[Hale Pinar], Mulkern, R.V.[Robert V.],
Measurement and analysis of nonexponential signal decay curves in brain diffusion and muscle relaxation magnetic resonance studies in humans,
IJIST(10), No. 3, 1999, pp. 294-303. BibRef 9900

Thulborn, K.R.[Keith R.], Uttecht, S.D.[Steve D.],
Volumetry and topography of the human brain by magnetic resonance imaging,
IJIST(11), No. 3, 2000, pp. 198-208. 0102 BibRef

Kovalev, V.A., Kruggel, F., Gertz, H.J., von Cramon, D.Y.,
Three-dimensional texture analysis of MRI brain datasets,
MedImg(20), No. 5, May 2001, pp. 424-433.
IEEE Top Reference. 0110 BibRef

Kovalev, V.A.[Vassili A.], Kruggel, F.[Frithjof],
Texture Anisotropy of the Brain's White Matter as Revealed by Anatomical MRI,
MedImg(26), No. 5, May 2007, pp. 678-685.
WWW Version. 0705 BibRef

Kovalev, V.A., Kruggel, F., von Cramon, D.Y.,
Structural brain asymmetry as revealed by 3d texture analysis of anatomical MR images,
ICPR02(I: 808-811).
WWW Version. 0211 BibRef

Xu, C., Pham, D.L., Rettmann, M.E., Yu, D.N., Prince, J.L.,
Reconstruction of the human cerebral cortex from magnetic resonance images,
MedImg(18), No. 6, June 1999, pp. 467-480.
IEEE Top Reference. 0110 BibRef

Pham, D.L., Prince, J.L.,
Partial volume estimation and the fuzzy C-means algorithm,
ICIP98(III: 819-822).
WWW Version. 9810brain MRI application BibRef

Bullmore, E.T., Suckling, J., Overmeyer, S., Rabe-Hesketh, S., Taylor, E., Brammer, M.J.,
Global, voxel, and cluster tests, by theory and permutation, for a difference between two groups of structural MR images of the brain,
MedImg(18), No. 1, January 1999, pp. 32-42.
IEEE Top Reference. 0110 BibRef

Amit, Y.,
Graphical shape templates for automatic anatomy detection with applications to MRI brain scans,
MedImg(16), No. 1, February 1997, pp. 28-40.
IEEE Top Reference. 0205 BibRef

Dehmeshki, J., Barker, G.J., Tofts, P.S.,
Classification of disease subgroup and correlation with disease severity using magnetic resonance imaging whole-brain histograms: application to magnetization transfer ratios and multiple sclerosis,
MedImg(21), No. 4, April 2002, pp. 320-331.
IEEE Top Reference. 0206 BibRef

Iftekharuddin, K.M.[Khan M.], Jia, W.[Wei], Marsh, R.[Ronald],
Fractal analysis of tumor in brain MR images,
MVA(13), No. 5-6, 2003, pp. 352-362.
HTML Version. 0304 See also FractalNet: A biologically inspired neural network approach to fractal geometry. BibRef

Bullitt, E., Gerig, G., Pizer, S.M.[Stephen M.], Lin, W.[Weili], Aylward, S.R.,
Measuring tortuosity of the intracerebral vasculature from MRA images,
MedImg(22), No. 9, September 2003, pp. 1163-1171.
IEEE Abstract. IEEE Top Reference. 0309 BibRef

Studholme, C., Cardenas, V., Song, E., Ezekiel, F., Maudsley, A.A., Weiner, M.,
Accurate Template-Based Correction of Brain MRI Intensity Distortion With Application to Dementia and Aging,
MedImg(23), No. 1, January 2004, pp. 99-110.
IEEE Abstract. IEEE Top Reference. 0403 BibRef

Bao, Y.[Yufang], Maudsley, A.A.[Andrew A.],
Improved Reconstruction for MR Spectroscopic Imaging,
MedImg(26), No. 5, May 2007, pp. 686-695.
WWW Version. 0705 BibRef

Drapaca, C.S.[Corina S.], Cardenas, V.[Valerie], Studholme, C.[Colin],
Segmentation of tissue boundary evolution from brain MR image sequences using multi-phase level sets,
CVIU(100), No. 3, December 2005, pp. 312-329.
WWW Version. 0512 BibRef

Studholme, C., Drapaca, C.S., Iordanova, B., Cardenas, V.,
Deformation-Based Mapping of Volume Change From Serial Brain MRI in the Presence of Local Tissue Contrast Change,
MedImg(25), No. 5, May 2006, pp. 626-639.
WWW Version. 0605 BibRef

Koretz, J.F.[Jane F.], Strenk, S.A.[Susan A.], Strenk, L.M.[Lawrence M.], Semmlow, J.L.[John L.],
Scheimpflug and high-resolution Magnetic Resonance Imaging of the anterior segment: a comparative study,
JOSA-A(21), No. 3, March 2004, pp. 346-354.
WWW Version. 0409 BibRef

Sajda, P., Du, S., Brown, T.R., Stoyanova, R.S., Shungu, D.C., Mao, X.[Xiangling], Parra, L.C.,
Nonnegative matrix factorization for rapid recovery of constituent spectra in magnetic resonance chemical shift imaging of the brain,
MedImg(23), No. 12, December 2004, pp. 1453-1465.
IEEE Abstract. IEEE Top Reference. 0412 BibRef

Barta, P., Miller, M.I., Qiu, A.,
A Stochastic Model for Studying the Laminar Structure of Cortex From MRI,
MedImg(24), No. 6, June 2005, pp. 728-742.
IEEE Abstract. IEEE Top Reference. 0506 BibRef

Wismüller, A.[Axel], Meyer-Baese, A., Lange, O.[Oliver], Reiser, M.F., Leinsinger, G.L.[Gerda L.],
Cluster Analysis of Dynamic Cerebral Contrast-Enhanced Perfusion MRI Time-Series,
MedImg(25), No. 1, January 2006, pp. 62-73.
WWW Version. 0601 See also Cluster Analysis of Biomedical Image Time-Series. BibRef

Bach Cuadra, M., Cammoun, L., Butz, T., Cuisenaire, O., Thiran, J.P.,
Comparison and validation of tissue modelization and statistical classification methods in T1-weighted MR brain images,
MedImg(24), No. 12, December 2005, pp. 1548-1565.
WWW Version. 0601 BibRef
And: Correction: MedImg(25), No. 2, February 2006, pp. 241-241.
WWW Version. 0602 BibRef

Linguraru, M.G., Ayache, N., Bardinet, E., Gonzalez Ballester, M.A., Galanaud, D., Haik, S., Faucheux, B., Hauw, J.J., Cozzone, P., Dormont, D., Brandel, J.P.,
Differentiation of sCJD and vCJD Forms by Automated Analysis of Basal Ganglia Intensity Distribution in Multisequence MRI of the Brain: Definition and Evaluation of New MRI-Based Ratios,
MedImg(25), No. 8, August 2006, pp. 1052-1067.
WWW Version. 0608 BibRef

Sebastiani, G.[Giovanni], de Pasquale, F.[Francesco], Barone, P.[Piero],
Quantifying Human Brain Connectivity from Diffusion Tensor MRI,
JMIV(25), No. 2, September 2006, pp. 227-244.
WWW Version. 0610 See also Solving an Inverse Diffusion Problem for Magnetic Resonance Dosimetry by a Fast Regularization Method. BibRef

Schmid, V.J., Whitcher, B., Padhani, A.R., Taylor, N.J., Yang, G.Z.,
Bayesian Methods for Pharmacokinetic Models in Dynamic Contrast-Enhanced Magnetic Resonance Imaging,
MedImg(25), No. 12, December 2006, pp. 1627-1636.
WWW Version. 0701 BibRef

Peled, S.,
New Perspectives on the Sources of White Matter DTI Signal,
MedImg(26), No. 11, November 2007, pp. 1448-1455.
WWW Version. 0709 BibRef

Thomaz, C.E.[Carlos E.], Duran, F.L.S.[Fabio L. S.], Busatto, G.F.[Geraldo F.], Gillies, D.F.[Duncan F.], Rueckert, D.[Daniel],
Multivariate Statistical Differences of MRI Samples of the Human Brain,
JMIV(29), No. 2-3, November 2007, pp. 95-106.
WWW Version. 0712 BibRef

Horsfield, M.A., Bakshi, R., Rovaris, M., Rocca, M.A., Dandamudi, V.S.R., Valsasina, P., Judica, E., Lucchini, F., Guttmann, C.R.G., Sormani, M.P., Filippi, M.,
Incorporating Domain Knowledge Into the Fuzzy Connectedness Framework: Application to Brain Lesion Volume Estimation in Multiple Sclerosis,
MedImg(26), No. 12, December 2007, pp. 1670-1680.
WWW Version. 0712 BibRef

Schaer, M., Cuadra, M.B., Tamarit, L., Lazeyras, F., Eliez, S., Thiran, J.P.,
A Surface-Based Approach to Quantify Local Cortical Gyrification,
MedImg(27), No. 2, February 2008, pp. 161-170.
WWW Version. 0802 BibRef

Shi, Y.G.[Yong-Gang], Thompson, P.M., Dinov, I., Toga, A.W.,
Hamilton-Jacobi Skeleton on Cortical Surfaces,
MedImg(27), No. 5, May 2008, pp. 664-673.
WWW Version. 0711 BibRef

Shi, L.[Lin], Wang, D.[Defeng], Heng, P.A.[Pheng Ann], Wong, T.T.[Tien-Tsin], Chu, W.C.W.[Winnie C.W.], Yeung, B.H.Y.[Benson H.Y.], Cheng, J.C.Y.[Jack C.Y.],
Discriminative analysis of skull morphology in adolescent idiopathic scoliosis patients: Comparative study with normal controls,
PR(41), No. 9, September 2008, pp. 2800-2811.
WWW Version. 0806Adolescent idiopathic scoliosis; Statistical morphometric analysis; Feature selection; Surface smoothing BibRef

Cho, Z.H.[Zang-Hee], Kim, Y.B.[Young-Bo], Han, J.Y.[Jae-Yong], Min, H.K.[Hoon-Ki], Kim, K.N.[Kyoung-Nam], Choi, S.H.[Sang-Han], Veklerov, E.[Eugene], Shepp, L.A.[Larry A.],
New brain atlas - Mapping the human brain in vivo with 7.0 T MRI and comparison with postmortem histology: Will these images change modern medicine?,
IJIST(18), No. 1, 2008, pp. 2-8.
WWW Version. 0806 BibRef

Kwon, M.J.[Min Jeong], Hahn, J.[Jooyoung], Park, H.W.[Hyun-Wook],
A fast spherical inflation method of the cerebral cortex by deformation of a simplex mesh on the polar coordinates,
IJIST(18), No. 1, 2008, pp. 9-16.
WWW Version. 0806 BibRef

Pienaar, R., Fischl, B., Caviness, V., Makris, N., Grant, P.E.,
A methodology for analyzing curvature in the developing brain from preterm to adult,
IJIST(18), No. 1, 2008, pp. 42-68.
WWW Version. 0806 BibRef

Marzelli, M.[Matthew], Fischer, K.[Krisztina], Kim, Y.B.[Young Beom], Mulkern, R.V.[Robert V.], Yoo, S.S.[Seung-Schik], Park, H.W.[Hyun-Wook], Cho, Z.H.[Zang-Hee],
Composite MR contrast agents for conditional cell-labeling,
IJIST(18), No. 1, 2008, pp. 79-84.
WWW Version. 0806 BibRef


Shaker, M.[Matineh], Soltanian-Zadeh, H.[Hamid],
Voxel-Based Morphometric Study of Brain Regions from Magnetic Resonance Images in Temporal Lobe Epilepsy,
Southwest08(209-212).
WWW Version. 0803 BibRef

Mio, W., Bowers, J.C., Hurdal, M.K., Liu, X.,
Modeling Brain Anatomy with 3D Arrangements of Curves,
MMBIA07(1-8).
WWW Version. 0710 BibRef

Das, S.R.[Sandhitsu R.], Avants, B.B.[Brian B.], Grossman, M.[Murray], Gee, J.C.[James C.],
Measuring Cortical Thickness Using An Image Domain Local Surface Model And Topology Preserving Segmentation,
MMBIA07(1-8).
WWW Version. 0710 BibRef

DeLorenzo, C.[Christine], Papademetris, X.[Xenophon], Staib, L.H.[Lawrence H.], Vives, K.P.[Kenneth P.], Spencer, D.D.[Dennis D.], Duncan, J.S.[James S.],
Nonrigid Intraoperative Cortical Surface Tracking Using Game Theory,
MMBIA07(1-8).
WWW Version. 0710 BibRef

Yu, P.[Peng], Yeo, B.T.T.[Boon Thye Thomas], Grant, P.E.[P. Ellen], Fischl, B.[Bruce], Golland, P.[Polina],
Cortical Folding Development Study based on Over-Complete Spherical Wavelets,
MMBIA07(1-8).
WWW Version. 0710 BibRef

Bose, B.[Biswajit], Fisher, J.[John], Fischl, B.[Bruce], Hinds, O.[Oliver], Grimson, W.E.L.[W. Eric L.],
Detecting Cortical Surface Regions in Structural MR Data,
MMBIA07(1-8).
WWW Version. 0710 BibRef

Liu, J.D.[Jun-Dong], Chelberg, D.[David], Smith, C.[Charles], Chebrolu, H.[Hima],
Automatic Subcortical Structure Segmentation Using Probabilistic Atlas,
ISVC07(I: 170-178).
WWW Version. 0711 BibRef

Tsai, A.[Andy], Westin, C.F.[Carl-Fredrik], Hero, A.O.[Alfred O.], Willsky, A.S.[Alan S.],
Fiber Tract Clustering on Manifolds With Dual Rooted-Graphs,
CVPR07(1-6).
WWW Version. 0706 BibRef

Parveen, R.[Runa], Ruff, C.[Cliff], Todd-Pokropek, A.[Andrew],
Three Dimensional Tissue Classifications in MR Brain Images,
CVAMIA06(236-247).
WWW Version. 0605 BibRef

Doan, H.N.[Huy-Nam], Slabaugh, G.G., Unal, G., Fang, T.[Tong],
Semi-Automatic 3-D Segmentation of Anatomical Structures of Brain MRI Volumes using Graph Cuts,
ICIP06(1913-1916). 0610
WWW Version. BibRef

Barrile, V., Cacciola, M., Minniti, C., Versaci, M.,
Remote detection of cerebral pathologies in magnetic resonance imagery: an unsupervised heuristic approach,
IEVM06(xx-yy).
PDF Version. 0609 BibRef

Yushkevich, P.A.[Paul A.], Avants, B.B.[Brian B.], Ng, L.[Lydia], Hawrylycz, M.[Michael], Burstein, P.D.[Pablo D.], Zhang, H.[Hui], Gee, J.C.[James C.],
3D Mouse Brain Reconstruction from Histology Using a Coarse-to-Fine Approach,
WBIR06(230-237).
WWW Version. 0607 BibRef

Maheswaran, S.[Satheesh], Barjat, H.[Hervé], Bate, S.[Simon], Hartkens, T.[Thomas], Hill, D.L.G.[Derek L. G.], James, M.F.[Michael F.], Tilling, L.[Lorna], Upton, N.[Neil], Hajnal, J.V.[Jo V.], Rueckert, D.[Daniel],
Deformation Based Morphometry Analysis of Serial Magnetic Resonance Images of Mouse Brains,
WBIR06(58-65).
WWW Version. 0607 BibRef

Masutani, Y.[Yoshitaka], Aoki, S.[Shigeki], Abe, O.[Osamu], Yoshida, M.[Mariko], Yamada, H.[Haruyasu], Mori, H.[Harushi], Ino, K.[Kenji], Ohtomo, K.[Kuni],
Building Statistical Atlas of White Matter Fiber Tract Based on Vector/Tensor Field Reconstruction in Diffusion Tensor MRI,
ISVC05(84-91).
WWW Version. 0512 BibRef

Gong, G.[Gaolang], Jiang, T.Z.[Tian-Zi], Xie, S.[Sheng], Lin, F.C.[Fu-Chun],
Parcellating the Intra-splenium Based on the Traced Fiber from Tractography,
CVBIA05(544-550).
WWW Version. 0601 BibRef

Castellano, G., Lotufo, R.A., Falcao, A.X., Cendes, F.,
Characterization of the Human Cortex in MR Images Through the Image Foresting Transform,
ICIP03(I: 357-360).
IEEE Abstract. IEEE Top Reference. 0312 BibRef

Duchesne, S., Bernasconi, N., Bernasconi, A., Collins, D.L.,
On the classification of temporal lobe epilepsy using MR image appearance,
ICPR02(I: 520-523).
WWW Version. 0211 BibRef

Pescatore, J., Garnero, L., Bloch, I.,
Tetrahedral 3D finite element meshes of head tissues from MRI for the MEG/EEG forward problem,
SCIA01(O-Tu3A). 0206 BibRef

Xue, J.H.,
Fuzzy Modeling of Knowledge for MRI Brain Structure Segmentation,
ICIP00(Vol I: 617-620).
IEEE Abstract. IEEE Top Reference. 0008 BibRef

Lohmann, G.[Gabriele], von Cramon, D.Y.[D. Yves],
Automatic Detection and Labelling of the Human Cortical Folds in Magnetic Resonance Data Sets,
ECCV98(II: 369).
WWW Version. BibRef 9800

Ripley, B.D., Marchini, J.,
Statistical Considerations in Magnetic Resonance Imaging of Brain Function,
SCIA99(Invited Talk). BibRef 9900

Saita, S., Nobuta, M., Niki, N., Nakasato, N., Yoshimoto, T.,
An Estimation Algorithm of Neuromagnetic Sources in the Cortical Region Using Realistically-Shaped Head Model,
ICIP99(III:891-895).
IEEE Abstract. IEEE Top Reference. BibRef 9900

Mino, K., Niki, N., Nakasato, N., and Yashimoto, T.,
Estimation of Neuromagnetic Source Location in the Cortical Region Using MR images,
ICIP97(III: 531-534).
WWW Version. BibRef 9700
Earlier:
A magnetic source estimation in the cortical region,
ICIP96(II: 261-264).
WWW Version. 9610 BibRef

Mino, K., Niki, N., Nakasato, N.,
A neuromagnetic source distribution estimation using MRI information,
ICIP95(I: 649-652).
WWW Version. 9510 BibRef

Lohmann, G., Kruggel, F.,
Extracting Lines of Maximal Depth from MRI Images of the Human Brain,
ICPR96(III: 518-522).
WWW Version. 9608(Max-Planck-Inst. of Cognitive Neuroscience, D) BibRef

Kumar, S.V.B., Mukhopadhyay, S., Nandedkar, V.,
A novel progressive thick slab paradigm for volumetric medical image compression and navigation,
ICIP04(III: 1899-1902).
WWW Version. 0505 BibRef

Nakazawa, Y., Saito, T.,
Region extraction with standard brain atlas for analysis of MRI brain images,
ICIP94(I: 387-391).
WWW Version. 9411 BibRef

Hess, A., Scheich, H.,
Three dimensional reconstructions of brains from 2-deoxyglucose serial section autoradiographs,
ICIP94(III: 290-294).
WWW Version. 9411 BibRef

Deruyver, A., Hode, Y., Soufflet, L.,
A segmentation technique for cerebral NMR images,
ICIP94(III: 716-720).
WWW Version. 9411 BibRef

Chapter on Medical Applications, CAT, MRI, Ultrasound, Heart Models, Brain Models continues in
Brain, Cortex, MRI Segmentation .


Last update:Jun 25, 2008 at 13:37:57